G2C::Synapse Proteomics Datasets
Introduction
Links are provided to the synapse proteomics datasets from Genes to Cognition (G2C) Programme publications in the G2Cdb database. These can be browsed, compared and downloaded online. For each dataset the original proteomics results are given mapped back to the relevant species gene identifiers, and to orthologous genes in another mammalian species.
If you wish to search for the presence of an individual gene or protein of interest in all the warehoused synapse proteomics lists, simply paste the protein or gene identifier into the top right-hand search box, and select the 'Gene lists' tab from the G2Cdb::Gene report (e.g. Grin1, PSD-95, Shank2).
Synapse proteomics reports
Bayés À, Collins MO, Croning MDR, van de Lagemaat LN, Choudhary JS, Grant SGN. [23071613]
| Description | Protein count | Original species proteomics | Orthologous list |
|---|---|---|---|
| Cortex PSD full protein list | 1556 | Mus musculus (view) | Homo sapiens (view) |
| Cortex PSD consensus proteins | 984 | Mus musculus (view) | Homo sapiens (view) |
Characterisation of the proteome, diseases and evolution of the human postsynaptic density
Bayés À, van de Lagemaat LN, Collins MO, Croning MDR, Whittle IR, Choudhary JS, Grant SGN. [21170055]
| Description | Protein count | Original species proteomics | Orthologous list |
|---|---|---|---|
| Cortex PSD full protein list | 1461 | Homo sapiens (view) | Mus musculus (view) |
| Cortex PSD consensus proteins | 748 | Homo sapiens (view) | Mus musculus (view) |
Fernandez E, Collins MO, Uren RT, Kopanitsa MV, Komiyama NH, Croning MDR, Zografos L, Armstrong JD, Choudhary JS, Grant SGN. [19455133]
| Description | Protein count | Original species proteomics | Orthologous list |
|---|---|---|---|
| TAP PSD-95 'core' protein list | 120 | Mus musculus (view) | Homo sapiens (view) |
Molecular characterization and comparison of the components and multiprotein complexes in the postsynaptic proteome.
Collins MO, Husi H, Yu L, Brandon JM, Anderson CN, Blackstock WP, Choudhary JS and Grant SG. [16635246]
| Description | Protein count | Original species proteomics | Orthologous list |
|---|---|---|---|
| AMPA receptor complex | 10 | Mus musculus (view) | Homo sapiens (view) |
| Clathrin-coated vesicle | 150 | Mus musculus (view) | Homo sapiens (view) |
| mGluR5 receptor complex | 64 | Mus musculus (view) | Homo sapiens (view) |
| Mitochondrial proteome | 91 | Mus musculus (view) | Homo sapiens (view) |
| NRC/MASC complex | 186 | Mus musculus (view) | Homo sapiens (view) |
| Postsynaptic proteome (PSP) | 1121 | Mus musculus (view) | Homo sapiens (view) |
| PSD complex | 1080 | Mus musculus (view) | Homo sapiens (view) |
| Synaptosome | 152 | Mus musculus (view) | Homo sapiens (view) |