Automated design of genomic Southern blot probes
Mike DR Croning, David G Fricker, Noboru H Komiyama and Seth GN Grant
Design Case - ProbeDesign16 - back to list
Summary
./analyse_probe_search_results : Tue Feb 13 12:54:38 2007
Connected to host: host, as user: user Database : southern_blot_designs Fetched probe design: ProbeDesign16 assembly : NCBIM36 bias : 5prime chromosome : 16 id : 3 strand : 1 ------------- Design window length: 4260bp All jobs for probe design are successful - total: 72 Fetched conf : Exonerate mouse_NCBIM36 (id: 1) Genome file(s) at: /blastdb/Mouse/NCBIM36/genome/softmasked_dusted Fetched 1423 putative probes to analyse Selection criteria to rank probes: Minimum score ratio : 10 (i.e. self-hit must score at least 10 times higher than the next best hit) Maximum percent repetitive bases: 5 Favour probes to the 5prime end of design window ------------------------ Putative probes without hits : 0 Putative probes with single_self_hit : 1423/1423 Putative probes that are unique : 156/1423 Putative probes exceeding selection criteria : 720/1423 (both unique and not unique) Putative probes with successfully-picked primers: 500/720 Identified 248 'redundant' probes exceeding selection criteria (but wholly contained by other probes, and higher repetitive DNA content)
Image
Unique (yellow), passed (green) and failed putative probes in the design window
Unique putative probes
Putative probe ID | Length | Actual | %rep DNA | Distance |
---|---|---|---|---|
2707 | 900 | 4500 | - | 3330 |
2749 | 850 | 4250 | - | 1722 |
2750 | 850 | 4250 | - | 1764 |
2787 | 850 | 4250 | - | 3318 |
2788 | 850 | 4250 | - | 3360 |
2789 | 850 | 4250 | - | 3402 |
2833 | 800 | 4000 | - | 1720 |
2834 | 800 | 4000 | - | 1760 |
2835 | 800 | 4000 | - | 1800 |
2873 | 800 | 4000 | - | 3320 |
2874 | 800 | 4000 | - | 3360 |
2875 | 800 | 4000 | - | 3400 |
2876 | 800 | 4000 | - | 3440 |
2924 | 750 | 3750 | - | 1739 |
2925 | 750 | 3750 | - | 1776 |
2926 | 750 | 3750 | - | 1813 |
2927 | 750 | 3750 | - | 1850 |
2967 | 750 | 3750 | - | 3330 |
2968 | 750 | 3750 | - | 3367 |
2969 | 750 | 3750 | - | 3404 |
2970 | 750 | 3750 | - | 3441 |
2971 | 750 | 3750 | - | 3478 |
3021 | 700 | 3500 | - | 1715 |
3022 | 700 | 3500 | - | 1750 |
3023 | 700 | 3500 | - | 1785 |
3024 | 700 | 3500 | - | 1820 |
3025 | 700 | 3500 | - | 1855 |
3026 | 700 | 3500 | - | 1890 |
3027 | 700 | 3500 | - | 1925 |
3067 | 700 | 3500 | - | 3325 |
3068 | 700 | 3500 | - | 3360 |
3069 | 700 | 3500 | - | 3395 |
3070 | 700 | 3500 | - | 3430 |
3071 | 700 | 3500 | - | 3465 |
3072 | 700 | 3500 | - | 3500 |
3073 | 700 | 3500 | - | 3535 |
3128 | 650 | 3250 | - | 1728 |
3129 | 650 | 3250 | - | 1760 |
3130 | 650 | 3250 | - | 1792 |
3131 | 650 | 3250 | - | 1824 |
3132 | 650 | 3250 | - | 1856 |
3133 | 650 | 3250 | - | 1888 |
3134 | 650 | 3250 | - | 1920 |
3135 | 650 | 3250 | - | 1952 |
3178 | 650 | 3250 | - | 3328 |
3179 | 650 | 3250 | - | 3360 |
3180 | 650 | 3250 | - | 3392 |
3181 | 650 | 3250 | - | 3424 |
3182 | 650 | 3250 | - | 3456 |
3183 | 650 | 3250 | - | 3488 |
3184 | 650 | 3250 | - | 3520 |
3185 | 650 | 3250 | - | 3552 |
3186 | 650 | 3250 | - | 3584 |
3245 | 600 | 3000 | - | 1740 |
3246 | 600 | 3000 | - | 1770 |
3247 | 600 | 3000 | - | 1800 |
3248 | 600 | 3000 | - | 1830 |
3249 | 600 | 3000 | - | 1860 |
3250 | 600 | 3000 | - | 1890 |
3251 | 600 | 3000 | - | 1920 |
3252 | 600 | 3000 | - | 1950 |
3253 | 600 | 3000 | - | 1980 |
3254 | 600 | 3000 | - | 2010 |
3298 | 600 | 3000 | - | 3330 |
3299 | 600 | 3000 | - | 3360 |
3300 | 600 | 3000 | - | 3390 |
3301 | 600 | 3000 | - | 3420 |
3302 | 600 | 3000 | - | 3450 |
3303 | 600 | 3000 | - | 3480 |
3304 | 600 | 3000 | - | 3510 |
3305 | 600 | 3000 | - | 3540 |
3306 | 600 | 3000 | - | 3570 |
3307 | 600 | 3000 | - | 3600 |
3308 | 600 | 3000 | - | 3630 |
3309 | 550 | 2750 | - | 0 |
3373 | 550 | 2750 | - | 1728 |
3374 | 550 | 2750 | - | 1755 |
3375 | 550 | 2750 | - | 1782 |
3376 | 550 | 2750 | - | 1809 |
3377 | 550 | 2750 | - | 1836 |
3378 | 550 | 2750 | - | 1863 |
3379 | 550 | 2750 | - | 1890 |
3380 | 550 | 2750 | - | 1917 |
3381 | 550 | 2750 | - | 1944 |
3382 | 550 | 2750 | - | 1971 |
3383 | 550 | 2750 | - | 1998 |
3384 | 550 | 2750 | - | 2025 |
3385 | 550 | 2750 | - | 2052 |
3432 | 550 | 2750 | - | 3321 |
3433 | 550 | 2750 | - | 3348 |
3434 | 550 | 2750 | - | 3375 |
3435 | 550 | 2750 | - | 3402 |
3436 | 550 | 2750 | - | 3429 |
3437 | 550 | 2750 | - | 3456 |
3438 | 550 | 2750 | - | 3483 |
3439 | 550 | 2750 | - | 3510 |
3440 | 550 | 2750 | - | 3537 |
3441 | 550 | 2750 | - | 3564 |
3442 | 550 | 2750 | - | 3591 |
3443 | 550 | 2750 | - | 3618 |
3444 | 550 | 2750 | - | 3645 |
3445 | 550 | 2750 | - | 3672 |
3446 | 550 | 2750 | - | 3699 |
3447 | 500 | 2500 | - | 0 |
3448 | 500 | 2500 | - | 25 |
3449 | 500 | 2500 | - | 50 |
3493 | 500 | 2500 | - | 1150 |
3494 | 500 | 2500 | - | 1175 |
3516 | 500 | 2500 | - | 1725 |
3517 | 500 | 2500 | - | 1750 |
3518 | 500 | 2500 | - | 1775 |
3519 | 500 | 2500 | - | 1800 |
3520 | 500 | 2500 | - | 1825 |
3521 | 500 | 2500 | - | 1850 |
3522 | 500 | 2500 | - | 1875 |
3523 | 500 | 2500 | - | 1900 |
3524 | 500 | 2500 | - | 1925 |
3525 | 500 | 2500 | - | 1950 |
3526 | 500 | 2500 | - | 1975 |
3527 | 500 | 2500 | - | 2000 |
3528 | 500 | 2500 | - | 2025 |
3529 | 500 | 2500 | - | 2050 |
3530 | 500 | 2500 | - | 2075 |
3531 | 500 | 2500 | - | 2100 |
3532 | 500 | 2500 | - | 2125 |
3580 | 500 | 2500 | - | 3325 |
3581 | 500 | 2500 | - | 3350 |
3582 | 500 | 2500 | - | 3375 |
3583 | 500 | 2500 | - | 3400 |
3584 | 500 | 2500 | - | 3425 |
3585 | 500 | 2500 | - | 3450 |
3586 | 500 | 2500 | - | 3475 |
3587 | 500 | 2500 | - | 3500 |
3588 | 500 | 2500 | - | 3525 |
3589 | 500 | 2500 | - | 3550 |
3590 | 500 | 2500 | - | 3575 |
3591 | 500 | 2500 | - | 3600 |
3592 | 500 | 2500 | - | 3625 |
3593 | 500 | 2500 | - | 3650 |
3594 | 500 | 2500 | - | 3675 |
3595 | 500 | 2500 | - | 3700 |
3596 | 500 | 2500 | - | 3725 |
3597 | 500 | 2500 | - | 3750 |
2671 | 900 | 4500 | 0.6 | 1710 |
3244 | 600 | 3000 | 0.8 | 1710 |
3473 | 500 | 2500 | 1.4 | 650 |
2923 | 750 | 3750 | 1.7 | 1702 |
3372 | 550 | 2750 | 2.5 | 1701 |
3127 | 650 | 3250 | 2.9 | 1696 |
3515 | 500 | 2500 | 3.0 | 1700 |
2748 | 850 | 4250 | 3.5 | 1680 |
2832 | 800 | 4000 | 3.8 | 1680 |
3020 | 700 | 3500 | 4.3 | 1680 |
3243 | 600 | 3000 | 5.0 | 1680 |
3371 | 550 | 2750 | 5.5 | 1674 |
3514 | 500 | 2500 | 6.0 | 1675 |
Putative probes
Putative probe ID | Length | Score ratio | Actual | %rep DNA | Distance | Overall |
---|---|---|---|---|---|---|
2269 | 1250 | 35.9 | 6250 | - | 2976 | 35.9 |
2220 | 1300 | 37.4 | 6500 | 0.8 | 2925 | 35.7 |
2319 | 1200 | 34.5 | 6000 | - | 2940 | 34.5 |
2320 | 1200 | 34.5 | 6000 | - | 3000 | 34.5 |
2373 | 1150 | 33.0 | 5750 | - | 2964 | 33.0 |
2374 | 1150 | 33.0 | 5750 | - | 3021 | 33.0 |
2375 | 1150 | 33.0 | 5750 | - | 3078 | 33.0 |
2186 | 1300 | 37.6 | 6500 | 2.3 | 715 | 33.0 |
2187 | 1300 | 37.6 | 6500 | 2.3 | 780 | 33.0 |
2188 | 1300 | 37.6 | 6500 | 2.3 | 845 | 33.0 |
2189 | 1300 | 37.6 | 6500 | 2.3 | 910 | 33.0 |
2190 | 1300 | 37.6 | 6500 | 2.3 | 975 | 33.0 |
2191 | 1300 | 37.6 | 6500 | 2.3 | 1040 | 33.0 |
2192 | 1300 | 37.6 | 6500 | 2.3 | 1105 | 33.0 |
2193 | 1300 | 37.6 | 6500 | 2.3 | 1170 | 33.0 |
2194 | 1300 | 37.6 | 6500 | 2.3 | 1235 | 33.0 |
2195 | 1300 | 37.6 | 6500 | 2.3 | 1300 | 33.0 |
2185 | 1300 | 37.6 | 6500 | 2.8 | 650 | 31.9 |
2430 | 1100 | 31.6 | 5500 | - | 2970 | 31.6 |
2431 | 1100 | 31.6 | 5500 | - | 3025 | 31.6 |
2432 | 1100 | 31.6 | 5500 | - | 3080 | 31.6 |
2433 | 1100 | 31.6 | 5500 | - | 3135 | 31.6 |
2196 | 1300 | 37.6 | 6500 | 3.0 | 1365 | 31.6 |
2232 | 1250 | 36.1 | 6250 | 2.4 | 682 | 31.3 |
2243 | 1250 | 36.1 | 6250 | 2.4 | 1364 | 31.3 |
2268 | 1250 | 34.7 | 6250 | 1.8 | 2914 | 31.2 |
2491 | 1050 | 30.2 | 5250 | - | 2964 | 30.2 |
2492 | 1050 | 30.2 | 5250 | - | 3016 | 30.2 |
2493 | 1050 | 30.2 | 5250 | - | 3068 | 30.2 |
2494 | 1050 | 30.2 | 5250 | - | 3120 | 30.2 |
2495 | 1050 | 30.2 | 5250 | - | 3172 | 30.2 |
2281 | 1200 | 34.7 | 6000 | 2.5 | 660 | 29.7 |
2282 | 1200 | 34.7 | 6000 | 2.5 | 720 | 29.7 |
2294 | 1200 | 34.7 | 6000 | 2.5 | 1440 | 29.7 |
2555 | 1000 | 28.7 | 5000 | - | 2950 | 28.7 |
2556 | 1000 | 28.7 | 5000 | - | 3000 | 28.7 |
2557 | 1000 | 28.7 | 5000 | - | 3050 | 28.7 |
2558 | 1000 | 28.7 | 5000 | - | 3100 | 28.7 |
2559 | 1000 | 28.7 | 5000 | - | 3150 | 28.7 |
2560 | 1000 | 28.7 | 5000 | - | 3200 | 28.7 |
2561 | 1000 | 28.7 | 5000 | - | 3250 | 28.7 |
2632 | 950 | 28.4 | 4750 | - | 3290 | 28.4 |
2244 | 1250 | 36.1 | 6250 | 4.0 | 1426 | 28.1 |
2333 | 1150 | 33.2 | 5750 | 2.6 | 684 | 28.0 |
2334 | 1150 | 33.2 | 5750 | 2.6 | 741 | 28.0 |
2335 | 1150 | 33.2 | 5750 | 2.6 | 798 | 28.0 |
2347 | 1150 | 33.2 | 5750 | 2.6 | 1482 | 28.0 |
2509 | 1000 | 29.4 | 5000 | 0.7 | 650 | 28.0 |
2576 | 950 | 27.9 | 4750 | - | 658 | 27.9 |
2577 | 950 | 27.9 | 4750 | - | 705 | 27.9 |
2625 | 950 | 27.3 | 4750 | - | 2961 | 27.3 |
2626 | 950 | 27.3 | 4750 | - | 3008 | 27.3 |
2627 | 950 | 27.3 | 4750 | - | 3055 | 27.3 |
2628 | 950 | 27.3 | 4750 | - | 3102 | 27.3 |
2629 | 950 | 27.3 | 4750 | - | 3149 | 27.3 |
2630 | 950 | 27.3 | 4750 | - | 3196 | 27.3 |
2631 | 950 | 27.3 | 4750 | - | 3243 | 27.3 |
2672 | 900 | 26.6 | 4500 | - | 1755 | 26.6 |
2648 | 900 | 26.5 | 4500 | - | 675 | 26.5 |
2649 | 900 | 26.5 | 4500 | - | 720 | 26.5 |
2650 | 900 | 26.5 | 4500 | - | 765 | 26.5 |
2510 | 1000 | 29.4 | 5000 | 1.5 | 700 | 26.4 |
2388 | 1100 | 31.8 | 5500 | 2.7 | 660 | 26.3 |
2389 | 1100 | 31.8 | 5500 | 2.7 | 715 | 26.3 |
2390 | 1100 | 31.8 | 5500 | 2.7 | 770 | 26.3 |
2391 | 1100 | 31.8 | 5500 | 2.7 | 825 | 26.3 |
2404 | 1100 | 31.8 | 5500 | 2.7 | 1540 | 26.3 |
2706 | 900 | 26.2 | 4500 | - | 3285 | 26.2 |
2699 | 900 | 25.9 | 4500 | - | 2970 | 25.9 |
2700 | 900 | 25.9 | 4500 | - | 3015 | 25.9 |
2701 | 900 | 25.9 | 4500 | - | 3060 | 25.9 |
2702 | 900 | 25.9 | 4500 | - | 3105 | 25.9 |
2703 | 900 | 25.9 | 4500 | - | 3150 | 25.9 |
2704 | 900 | 25.9 | 4500 | - | 3195 | 25.9 |
2705 | 900 | 25.9 | 4500 | - | 3240 | 25.9 |
2372 | 1150 | 30.7 | 5750 | 2.5 | 2907 | 25.7 |
2751 | 850 | 25.1 | 4250 | - | 1806 | 25.1 |
2724 | 850 | 25.0 | 4250 | - | 672 | 25.0 |
2725 | 850 | 25.0 | 4250 | - | 714 | 25.0 |
2726 | 850 | 25.0 | 4250 | - | 756 | 25.0 |
2727 | 850 | 25.0 | 4250 | - | 798 | 25.0 |
2464 | 1050 | 30.3 | 5250 | 2.9 | 1560 | 24.6 |
2446 | 1050 | 30.9 | 5250 | 3.1 | 624 | 24.6 |
2490 | 1050 | 29.2 | 5250 | 2.3 | 2912 | 24.6 |
2778 | 850 | 24.4 | 4250 | - | 2940 | 24.4 |
2779 | 850 | 24.4 | 4250 | - | 2982 | 24.4 |
2780 | 850 | 24.4 | 4250 | - | 3024 | 24.4 |
2781 | 850 | 24.4 | 4250 | - | 3066 | 24.4 |
2782 | 850 | 24.4 | 4250 | - | 3108 | 24.4 |
2783 | 850 | 24.4 | 4250 | - | 3150 | 24.4 |
2784 | 850 | 24.4 | 4250 | - | 3192 | 24.4 |
2785 | 850 | 24.4 | 4250 | - | 3234 | 24.4 |
2786 | 850 | 24.4 | 4250 | - | 3276 | 24.4 |
2578 | 950 | 27.9 | 4750 | 1.8 | 752 | 24.4 |
2728 | 850 | 25.0 | 4250 | 0.6 | 840 | 23.8 |
2836 | 800 | 23.7 | 4000 | - | 1840 | 23.7 |
2175 | 1300 | 33.2 | 6500 | 4.8 | 0 | 23.6 |
2176 | 1300 | 33.2 | 6500 | 4.8 | 65 | 23.6 |
2177 | 1300 | 33.2 | 6500 | 4.8 | 130 | 23.6 |
2178 | 1300 | 33.2 | 6500 | 4.8 | 195 | 23.6 |
2179 | 1300 | 33.2 | 6500 | 4.8 | 260 | 23.6 |
2180 | 1300 | 33.2 | 6500 | 4.8 | 325 | 23.6 |
2529 | 1000 | 29.6 | 5000 | 3.0 | 1650 | 23.6 |
2807 | 800 | 23.5 | 4000 | - | 680 | 23.5 |
2808 | 800 | 23.5 | 4000 | - | 720 | 23.5 |
2809 | 800 | 23.5 | 4000 | - | 760 | 23.5 |
2810 | 800 | 23.5 | 4000 | - | 800 | 23.5 |
2811 | 800 | 23.5 | 4000 | - | 840 | 23.5 |
2812 | 800 | 23.5 | 4000 | - | 880 | 23.5 |
2598 | 950 | 28.1 | 4750 | 2.4 | 1692 | 23.3 |
2872 | 800 | 23.3 | 4000 | - | 3280 | 23.3 |
2864 | 800 | 23.0 | 4000 | - | 2960 | 23.0 |
2865 | 800 | 23.0 | 4000 | - | 3000 | 23.0 |
2866 | 800 | 23.0 | 4000 | - | 3040 | 23.0 |
2867 | 800 | 23.0 | 4000 | - | 3080 | 23.0 |
2868 | 800 | 23.0 | 4000 | - | 3120 | 23.0 |
2869 | 800 | 23.0 | 4000 | - | 3160 | 23.0 |
2870 | 800 | 23.0 | 4000 | - | 3200 | 23.0 |
2871 | 800 | 23.0 | 4000 | - | 3240 | 23.0 |
2928 | 750 | 22.9 | 3750 | - | 1887 | 22.9 |
2966 | 750 | 22.9 | 3750 | - | 3293 | 22.9 |
2895 | 750 | 22.1 | 3750 | - | 666 | 22.1 |
2896 | 750 | 22.1 | 3750 | - | 703 | 22.1 |
2897 | 750 | 22.1 | 3750 | - | 740 | 22.1 |
2898 | 750 | 22.1 | 3750 | - | 777 | 22.1 |
2899 | 750 | 22.1 | 3750 | - | 814 | 22.1 |
2900 | 750 | 22.1 | 3750 | - | 851 | 22.1 |
2901 | 750 | 22.1 | 3750 | - | 888 | 22.1 |
2902 | 750 | 22.1 | 3750 | - | 925 | 22.1 |
2222 | 1250 | 31.9 | 6250 | 5.0 | 62 | 22.0 |
2223 | 1250 | 31.9 | 6250 | 5.0 | 124 | 22.0 |
2224 | 1250 | 31.9 | 6250 | 5.0 | 186 | 22.0 |
2225 | 1250 | 31.9 | 6250 | 5.0 | 248 | 22.0 |
2228 | 1250 | 31.9 | 6250 | 5.0 | 434 | 22.0 |
2957 | 750 | 21.6 | 3750 | - | 2960 | 21.6 |
2958 | 750 | 21.6 | 3750 | - | 2997 | 21.6 |
2959 | 750 | 21.6 | 3750 | - | 3034 | 21.6 |
2960 | 750 | 21.6 | 3750 | - | 3071 | 21.6 |
2961 | 750 | 21.6 | 3750 | - | 3108 | 21.6 |
2962 | 750 | 21.6 | 3750 | - | 3145 | 21.6 |
2963 | 750 | 21.6 | 3750 | - | 3182 | 21.6 |
2964 | 750 | 21.6 | 3750 | - | 3219 | 21.6 |
2965 | 750 | 21.6 | 3750 | - | 3256 | 21.6 |
2599 | 950 | 28.1 | 4750 | 3.5 | 1739 | 21.2 |
3066 | 700 | 21.0 | 3500 | - | 3290 | 21.0 |
2651 | 900 | 26.5 | 4500 | 2.8 | 810 | 20.9 |
2991 | 700 | 20.6 | 3500 | - | 665 | 20.6 |
2992 | 700 | 20.6 | 3500 | - | 700 | 20.6 |
2993 | 700 | 20.6 | 3500 | - | 735 | 20.6 |
2994 | 700 | 20.6 | 3500 | - | 770 | 20.6 |
2995 | 700 | 20.6 | 3500 | - | 805 | 20.6 |
2996 | 700 | 20.6 | 3500 | - | 840 | 20.6 |
2997 | 700 | 20.6 | 3500 | - | 875 | 20.6 |
2998 | 700 | 20.6 | 3500 | - | 910 | 20.6 |
2999 | 700 | 20.6 | 3500 | - | 945 | 20.6 |
3000 | 700 | 20.6 | 3500 | - | 980 | 20.6 |
2647 | 900 | 26.5 | 4500 | 3.0 | 630 | 20.5 |
3136 | 650 | 20.3 | 3250 | - | 1984 | 20.3 |
3056 | 700 | 20.1 | 3500 | - | 2940 | 20.1 |
3057 | 700 | 20.1 | 3500 | - | 2975 | 20.1 |
3058 | 700 | 20.1 | 3500 | - | 3010 | 20.1 |
3059 | 700 | 20.1 | 3500 | - | 3045 | 20.1 |
3060 | 700 | 20.1 | 3500 | - | 3080 | 20.1 |
3061 | 700 | 20.1 | 3500 | - | 3115 | 20.1 |
3062 | 700 | 20.1 | 3500 | - | 3150 | 20.1 |
3063 | 700 | 20.1 | 3500 | - | 3185 | 20.1 |
3064 | 700 | 20.1 | 3500 | - | 3220 | 20.1 |
3065 | 700 | 20.1 | 3500 | - | 3255 | 20.1 |
3177 | 650 | 19.8 | 3250 | - | 3296 | 19.8 |
3028 | 700 | 20.7 | 3500 | 0.6 | 1960 | 19.6 |
2806 | 800 | 23.5 | 4000 | 2.1 | 640 | 19.3 |
2554 | 1000 | 26.5 | 5000 | 3.6 | 2900 | 19.3 |
3095 | 650 | 19.1 | 3250 | - | 672 | 19.1 |
3096 | 650 | 19.1 | 3250 | - | 704 | 19.1 |
3097 | 650 | 19.1 | 3250 | - | 736 | 19.1 |
3098 | 650 | 19.1 | 3250 | - | 768 | 19.1 |
3099 | 650 | 19.1 | 3250 | - | 800 | 19.1 |
3100 | 650 | 19.1 | 3250 | - | 832 | 19.1 |
3101 | 650 | 19.1 | 3250 | - | 864 | 19.1 |
3102 | 650 | 19.1 | 3250 | - | 896 | 19.1 |
3103 | 650 | 19.1 | 3250 | - | 928 | 19.1 |
3104 | 650 | 19.1 | 3250 | - | 960 | 19.1 |
3105 | 650 | 19.1 | 3250 | - | 992 | 19.1 |
3106 | 650 | 19.1 | 3250 | - | 1024 | 19.1 |
3166 | 650 | 18.7 | 3250 | - | 2944 | 18.7 |
3167 | 650 | 18.7 | 3250 | - | 2976 | 18.7 |
3168 | 650 | 18.7 | 3250 | - | 3008 | 18.7 |
3169 | 650 | 18.7 | 3250 | - | 3040 | 18.7 |
3170 | 650 | 18.7 | 3250 | - | 3072 | 18.7 |
3171 | 650 | 18.7 | 3250 | - | 3104 | 18.7 |
3172 | 650 | 18.7 | 3250 | - | 3136 | 18.7 |
3173 | 650 | 18.7 | 3250 | - | 3168 | 18.7 |
3174 | 650 | 18.7 | 3250 | - | 3200 | 18.7 |
3175 | 650 | 18.7 | 3250 | - | 3232 | 18.7 |
3176 | 650 | 18.7 | 3250 | - | 3264 | 18.7 |
2723 | 850 | 25.0 | 4250 | 3.2 | 630 | 18.6 |
3297 | 600 | 18.3 | 3000 | - | 3300 | 18.3 |
2956 | 750 | 21.6 | 3750 | 1.7 | 2923 | 18.1 |
3310 | 550 | 17.9 | 2750 | - | 27 | 17.9 |
3187 | 600 | 19.5 | 3000 | 0.8 | 0 | 17.8 |
3255 | 600 | 17.8 | 3000 | - | 2040 | 17.8 |
2837 | 800 | 23.7 | 4000 | 3.0 | 1880 | 17.7 |
3209 | 600 | 17.6 | 3000 | - | 660 | 17.6 |
3210 | 600 | 17.6 | 3000 | - | 690 | 17.6 |
3211 | 600 | 17.6 | 3000 | - | 720 | 17.6 |
3212 | 600 | 17.6 | 3000 | - | 750 | 17.6 |
3213 | 600 | 17.6 | 3000 | - | 780 | 17.6 |
3214 | 600 | 17.6 | 3000 | - | 810 | 17.6 |
3215 | 600 | 17.6 | 3000 | - | 840 | 17.6 |
3216 | 600 | 17.6 | 3000 | - | 870 | 17.6 |
3217 | 600 | 17.6 | 3000 | - | 900 | 17.6 |
3218 | 600 | 17.6 | 3000 | - | 930 | 17.6 |
3219 | 600 | 17.6 | 3000 | - | 960 | 17.6 |
3220 | 600 | 17.6 | 3000 | - | 990 | 17.6 |
3221 | 600 | 17.6 | 3000 | - | 1020 | 17.6 |
3222 | 600 | 17.6 | 3000 | - | 1050 | 17.6 |
3223 | 600 | 17.6 | 3000 | - | 1080 | 17.6 |
2929 | 750 | 22.2 | 3750 | 2.4 | 1924 | 17.4 |
3285 | 600 | 17.2 | 3000 | - | 2940 | 17.2 |
3286 | 600 | 17.2 | 3000 | - | 2970 | 17.2 |
3287 | 600 | 17.2 | 3000 | - | 3000 | 17.2 |
3288 | 600 | 17.2 | 3000 | - | 3030 | 17.2 |
3289 | 600 | 17.2 | 3000 | - | 3060 | 17.2 |
3290 | 600 | 17.2 | 3000 | - | 3090 | 17.2 |
3291 | 600 | 17.2 | 3000 | - | 3120 | 17.2 |
3292 | 600 | 17.2 | 3000 | - | 3150 | 17.2 |
3293 | 600 | 17.2 | 3000 | - | 3180 | 17.2 |
3294 | 600 | 17.2 | 3000 | - | 3210 | 17.2 |
3295 | 600 | 17.2 | 3000 | - | 3240 | 17.2 |
3296 | 600 | 17.2 | 3000 | - | 3270 | 17.2 |
3351 | 550 | 17.2 | 2750 | - | 1134 | 17.2 |
3386 | 550 | 17.2 | 2750 | - | 2079 | 17.2 |
2673 | 900 | 26.6 | 4500 | 4.9 | 1800 | 16.8 |
3431 | 550 | 16.8 | 2750 | - | 3294 | 16.8 |
3387 | 550 | 16.3 | 2750 | - | 2106 | 16.3 |
3450 | 500 | 16.2 | 2500 | - | 75 | 16.2 |
3334 | 550 | 16.2 | 2750 | - | 675 | 16.2 |
3335 | 550 | 16.2 | 2750 | - | 702 | 16.2 |
3336 | 550 | 16.2 | 2750 | - | 729 | 16.2 |
3337 | 550 | 16.2 | 2750 | - | 756 | 16.2 |
3338 | 550 | 16.2 | 2750 | - | 783 | 16.2 |
3339 | 550 | 16.2 | 2750 | - | 810 | 16.2 |
3340 | 550 | 16.2 | 2750 | - | 837 | 16.2 |
3341 | 550 | 16.2 | 2750 | - | 864 | 16.2 |
3342 | 550 | 16.2 | 2750 | - | 891 | 16.2 |
3343 | 550 | 16.2 | 2750 | - | 918 | 16.2 |
3344 | 550 | 16.2 | 2750 | - | 945 | 16.2 |
3345 | 550 | 16.2 | 2750 | - | 972 | 16.2 |
3346 | 550 | 16.2 | 2750 | - | 999 | 16.2 |
3347 | 550 | 16.2 | 2750 | - | 1026 | 16.2 |
3348 | 550 | 16.2 | 2750 | - | 1053 | 16.2 |
3349 | 550 | 16.2 | 2750 | - | 1080 | 16.2 |
3350 | 550 | 16.2 | 2750 | - | 1107 | 16.2 |
3137 | 650 | 19.2 | 3250 | 1.5 | 2016 | 16.2 |
2318 | 1200 | 25.2 | 6000 | 4.7 | 2880 | 15.9 |
3418 | 550 | 15.8 | 2750 | - | 2943 | 15.8 |
3419 | 550 | 15.8 | 2750 | - | 2970 | 15.8 |
3420 | 550 | 15.8 | 2750 | - | 2997 | 15.8 |
3421 | 550 | 15.8 | 2750 | - | 3024 | 15.8 |
3422 | 550 | 15.8 | 2750 | - | 3051 | 15.8 |
3423 | 550 | 15.8 | 2750 | - | 3078 | 15.8 |
3424 | 550 | 15.8 | 2750 | - | 3105 | 15.8 |
3425 | 550 | 15.8 | 2750 | - | 3132 | 15.8 |
3426 | 550 | 15.8 | 2750 | - | 3159 | 15.8 |
3427 | 550 | 15.8 | 2750 | - | 3186 | 15.8 |
3428 | 550 | 15.8 | 2750 | - | 3213 | 15.8 |
3429 | 550 | 15.8 | 2750 | - | 3240 | 15.8 |
3430 | 550 | 15.8 | 2750 | - | 3267 | 15.8 |
3492 | 500 | 15.2 | 2500 | - | 1125 | 15.2 |
3579 | 500 | 15.2 | 2500 | - | 3300 | 15.2 |
3474 | 500 | 15.2 | 2500 | - | 675 | 15.2 |
3533 | 500 | 14.8 | 2500 | - | 2150 | 14.8 |
3475 | 500 | 14.7 | 2500 | - | 700 | 14.7 |
3476 | 500 | 14.7 | 2500 | - | 725 | 14.7 |
3477 | 500 | 14.7 | 2500 | - | 750 | 14.7 |
3478 | 500 | 14.7 | 2500 | - | 775 | 14.7 |
3479 | 500 | 14.7 | 2500 | - | 800 | 14.7 |
3480 | 500 | 14.7 | 2500 | - | 825 | 14.7 |
3481 | 500 | 14.7 | 2500 | - | 850 | 14.7 |
3482 | 500 | 14.7 | 2500 | - | 875 | 14.7 |
3483 | 500 | 14.7 | 2500 | - | 900 | 14.7 |
3484 | 500 | 14.7 | 2500 | - | 925 | 14.7 |
3485 | 500 | 14.7 | 2500 | - | 950 | 14.7 |
3486 | 500 | 14.7 | 2500 | - | 975 | 14.7 |
3487 | 500 | 14.7 | 2500 | - | 1000 | 14.7 |
3488 | 500 | 14.7 | 2500 | - | 1025 | 14.7 |
3489 | 500 | 14.7 | 2500 | - | 1050 | 14.7 |
3490 | 500 | 14.7 | 2500 | - | 1075 | 14.7 |
3491 | 500 | 14.7 | 2500 | - | 1100 | 14.7 |
2894 | 750 | 22.1 | 3750 | 3.7 | 629 | 14.6 |
3311 | 550 | 17.9 | 2750 | 1.6 | 54 | 14.6 |
3565 | 500 | 14.4 | 2500 | - | 2950 | 14.4 |
3566 | 500 | 14.4 | 2500 | - | 2975 | 14.4 |
3567 | 500 | 14.4 | 2500 | - | 3000 | 14.4 |
3568 | 500 | 14.4 | 2500 | - | 3025 | 14.4 |
3569 | 500 | 14.4 | 2500 | - | 3050 | 14.4 |
3570 | 500 | 14.4 | 2500 | - | 3075 | 14.4 |
3571 | 500 | 14.4 | 2500 | - | 3100 | 14.4 |
3572 | 500 | 14.4 | 2500 | - | 3125 | 14.4 |
3573 | 500 | 14.4 | 2500 | - | 3150 | 14.4 |
3574 | 500 | 14.4 | 2500 | - | 3175 | 14.4 |
3575 | 500 | 14.4 | 2500 | - | 3200 | 14.4 |
3576 | 500 | 14.4 | 2500 | - | 3225 | 14.4 |
3577 | 500 | 14.4 | 2500 | - | 3250 | 14.4 |
3578 | 500 | 14.4 | 2500 | - | 3275 | 14.4 |
3451 | 500 | 16.2 | 2500 | 1.0 | 100 | 14.2 |
3094 | 650 | 19.1 | 3250 | 2.6 | 640 | 13.9 |
3256 | 600 | 17.8 | 3000 | 2.3 | 2070 | 13.1 |
3333 | 550 | 16.2 | 2750 | 1.6 | 648 | 12.9 |
2990 | 700 | 20.6 | 3500 | 3.9 | 630 | 12.9 |
2777 | 850 | 21.7 | 4250 | 4.5 | 2898 | 12.7 |
3165 | 650 | 18.1 | 3250 | 3.7 | 2912 | 10.7 |
3055 | 700 | 18.3 | 3500 | 4.4 | 2905 | 9.5 |
3208 | 600 | 17.6 | 3000 | 4.5 | 630 | 8.6 |
3284 | 600 | 16.6 | 3000 | 4.3 | 2910 | 7.9 |
3534 | 500 | 14.8 | 2500 | 3.8 | 2175 | 7.2 |
Overall score = score_ratio - 2 * repetitive DNA content
Redundant probes
Putative probe ID | Length | Score ratio | Actual | %rep DNA | Distance | Overall |
---|---|---|---|---|---|---|
2233 | 1250 | 36.1 | 6250 | 2.4 | 744 | 31.3 |
2234 | 1250 | 36.1 | 6250 | 2.4 | 806 | 31.3 |
2235 | 1250 | 36.1 | 6250 | 2.4 | 868 | 31.3 |
2236 | 1250 | 36.1 | 6250 | 2.4 | 930 | 31.3 |
2237 | 1250 | 36.1 | 6250 | 2.4 | 992 | 31.3 |
2238 | 1250 | 36.1 | 6250 | 2.4 | 1054 | 31.3 |
2239 | 1250 | 36.1 | 6250 | 2.4 | 1116 | 31.3 |
2240 | 1250 | 36.1 | 6250 | 2.4 | 1178 | 31.3 |
2241 | 1250 | 36.1 | 6250 | 2.4 | 1240 | 31.3 |
2242 | 1250 | 36.1 | 6250 | 2.4 | 1302 | 31.3 |
2283 | 1200 | 34.7 | 6000 | 2.5 | 780 | 29.7 |
2284 | 1200 | 34.7 | 6000 | 2.5 | 840 | 29.7 |
2285 | 1200 | 34.7 | 6000 | 2.5 | 900 | 29.7 |
2286 | 1200 | 34.7 | 6000 | 2.5 | 960 | 29.7 |
2287 | 1200 | 34.7 | 6000 | 2.5 | 1020 | 29.7 |
2288 | 1200 | 34.7 | 6000 | 2.5 | 1080 | 29.7 |
2289 | 1200 | 34.7 | 6000 | 2.5 | 1140 | 29.7 |
2290 | 1200 | 34.7 | 6000 | 2.5 | 1200 | 29.7 |
2291 | 1200 | 34.7 | 6000 | 2.5 | 1260 | 29.7 |
2292 | 1200 | 34.7 | 6000 | 2.5 | 1320 | 29.7 |
2293 | 1200 | 34.7 | 6000 | 2.5 | 1380 | 29.7 |
2336 | 1150 | 33.2 | 5750 | 2.6 | 855 | 28.0 |
2337 | 1150 | 33.2 | 5750 | 2.6 | 912 | 28.0 |
2338 | 1150 | 33.2 | 5750 | 2.6 | 969 | 28.0 |
2339 | 1150 | 33.2 | 5750 | 2.6 | 1026 | 28.0 |
2340 | 1150 | 33.2 | 5750 | 2.6 | 1083 | 28.0 |
2341 | 1150 | 33.2 | 5750 | 2.6 | 1140 | 28.0 |
2342 | 1150 | 33.2 | 5750 | 2.6 | 1197 | 28.0 |
2343 | 1150 | 33.2 | 5750 | 2.6 | 1254 | 28.0 |
2344 | 1150 | 33.2 | 5750 | 2.6 | 1311 | 28.0 |
2345 | 1150 | 33.2 | 5750 | 2.6 | 1368 | 28.0 |
2346 | 1150 | 33.2 | 5750 | 2.6 | 1425 | 28.0 |
2429 | 1100 | 31.1 | 5500 | 1.9 | 2915 | 27.3 |
2392 | 1100 | 31.8 | 5500 | 2.7 | 880 | 26.3 |
2393 | 1100 | 31.8 | 5500 | 2.7 | 935 | 26.3 |
2394 | 1100 | 31.8 | 5500 | 2.7 | 990 | 26.3 |
2395 | 1100 | 31.8 | 5500 | 2.7 | 1045 | 26.3 |
2396 | 1100 | 31.8 | 5500 | 2.7 | 1100 | 26.3 |
2397 | 1100 | 31.8 | 5500 | 2.7 | 1155 | 26.3 |
2398 | 1100 | 31.8 | 5500 | 2.7 | 1210 | 26.3 |
2399 | 1100 | 31.8 | 5500 | 2.7 | 1265 | 26.3 |
2400 | 1100 | 31.8 | 5500 | 2.7 | 1320 | 26.3 |
2401 | 1100 | 31.8 | 5500 | 2.7 | 1375 | 26.3 |
2402 | 1100 | 31.8 | 5500 | 2.7 | 1430 | 26.3 |
2403 | 1100 | 31.8 | 5500 | 2.7 | 1485 | 26.3 |
2447 | 1050 | 30.3 | 5250 | 2.9 | 676 | 24.6 |
2448 | 1050 | 30.3 | 5250 | 2.9 | 728 | 24.6 |
2449 | 1050 | 30.3 | 5250 | 2.9 | 780 | 24.6 |
2450 | 1050 | 30.3 | 5250 | 2.9 | 832 | 24.6 |
2451 | 1050 | 30.3 | 5250 | 2.9 | 884 | 24.6 |
2452 | 1050 | 30.3 | 5250 | 2.9 | 936 | 24.6 |
2453 | 1050 | 30.3 | 5250 | 2.9 | 988 | 24.6 |
2454 | 1050 | 30.3 | 5250 | 2.9 | 1040 | 24.6 |
2455 | 1050 | 30.3 | 5250 | 2.9 | 1092 | 24.6 |
2456 | 1050 | 30.3 | 5250 | 2.9 | 1144 | 24.6 |
2457 | 1050 | 30.3 | 5250 | 2.9 | 1196 | 24.6 |
2458 | 1050 | 30.3 | 5250 | 2.9 | 1248 | 24.6 |
2459 | 1050 | 30.3 | 5250 | 2.9 | 1300 | 24.6 |
2460 | 1050 | 30.3 | 5250 | 2.9 | 1352 | 24.6 |
2461 | 1050 | 30.3 | 5250 | 2.9 | 1404 | 24.6 |
2462 | 1050 | 30.3 | 5250 | 2.9 | 1456 | 24.6 |
2463 | 1050 | 30.3 | 5250 | 2.9 | 1508 | 24.6 |
2465 | 1050 | 31.1 | 5250 | 3.4 | 1612 | 24.2 |
2597 | 950 | 29.9 | 4750 | 3.2 | 1645 | 23.6 |
2698 | 900 | 25.9 | 4500 | 1.2 | 2925 | 23.4 |
2670 | 900 | 29.6 | 4500 | 3.3 | 1665 | 22.9 |
2511 | 1000 | 28.9 | 5000 | 3.0 | 750 | 22.9 |
2512 | 1000 | 28.9 | 5000 | 3.0 | 800 | 22.9 |
2513 | 1000 | 28.9 | 5000 | 3.0 | 850 | 22.9 |
2514 | 1000 | 28.9 | 5000 | 3.0 | 900 | 22.9 |
2515 | 1000 | 28.9 | 5000 | 3.0 | 950 | 22.9 |
2516 | 1000 | 28.9 | 5000 | 3.0 | 1000 | 22.9 |
2517 | 1000 | 28.9 | 5000 | 3.0 | 1050 | 22.9 |
2518 | 1000 | 28.9 | 5000 | 3.0 | 1100 | 22.9 |
2519 | 1000 | 28.9 | 5000 | 3.0 | 1150 | 22.9 |
2520 | 1000 | 28.9 | 5000 | 3.0 | 1200 | 22.9 |
2521 | 1000 | 28.9 | 5000 | 3.0 | 1250 | 22.9 |
2522 | 1000 | 28.9 | 5000 | 3.0 | 1300 | 22.9 |
2523 | 1000 | 28.9 | 5000 | 3.0 | 1350 | 22.9 |
2524 | 1000 | 28.9 | 5000 | 3.0 | 1400 | 22.9 |
2525 | 1000 | 28.9 | 5000 | 3.0 | 1450 | 22.9 |
2526 | 1000 | 28.9 | 5000 | 3.0 | 1500 | 22.9 |
2527 | 1000 | 28.9 | 5000 | 3.0 | 1550 | 22.9 |
2528 | 1000 | 28.9 | 5000 | 3.0 | 1600 | 22.9 |
2221 | 1250 | 31.9 | 6250 | 5.0 | 0 | 22.0 |
2226 | 1250 | 31.9 | 6250 | 5.0 | 310 | 22.0 |
2227 | 1250 | 31.9 | 6250 | 5.0 | 372 | 22.0 |
2624 | 950 | 26.4 | 4750 | 2.3 | 2914 | 21.8 |
2669 | 900 | 28.1 | 4500 | 3.3 | 1620 | 21.5 |
2579 | 950 | 27.5 | 4750 | 3.2 | 799 | 21.1 |
2580 | 950 | 27.5 | 4750 | 3.2 | 846 | 21.1 |
2581 | 950 | 27.5 | 4750 | 3.2 | 893 | 21.1 |
2582 | 950 | 27.5 | 4750 | 3.2 | 940 | 21.1 |
2583 | 950 | 27.5 | 4750 | 3.2 | 987 | 21.1 |
2584 | 950 | 27.5 | 4750 | 3.2 | 1034 | 21.1 |
2585 | 950 | 27.5 | 4750 | 3.2 | 1081 | 21.1 |
2586 | 950 | 27.5 | 4750 | 3.2 | 1128 | 21.1 |
2587 | 950 | 27.5 | 4750 | 3.2 | 1175 | 21.1 |
2588 | 950 | 27.5 | 4750 | 3.2 | 1222 | 21.1 |
2589 | 950 | 27.5 | 4750 | 3.2 | 1269 | 21.1 |
2590 | 950 | 27.5 | 4750 | 3.2 | 1316 | 21.1 |
2591 | 950 | 27.5 | 4750 | 3.2 | 1363 | 21.1 |
2592 | 950 | 27.5 | 4750 | 3.2 | 1410 | 21.1 |
2593 | 950 | 27.5 | 4750 | 3.2 | 1457 | 21.1 |
2594 | 950 | 27.5 | 4750 | 3.2 | 1504 | 21.1 |
2595 | 950 | 27.5 | 4750 | 3.2 | 1551 | 21.1 |
2596 | 950 | 27.5 | 4750 | 3.2 | 1598 | 21.1 |
2747 | 850 | 26.7 | 4250 | 3.5 | 1638 | 19.7 |
2652 | 900 | 26.0 | 4500 | 3.3 | 855 | 19.3 |
2653 | 900 | 26.0 | 4500 | 3.3 | 900 | 19.3 |
2654 | 900 | 26.0 | 4500 | 3.3 | 945 | 19.3 |
2655 | 900 | 26.0 | 4500 | 3.3 | 990 | 19.3 |
2656 | 900 | 26.0 | 4500 | 3.3 | 1035 | 19.3 |
2657 | 900 | 26.0 | 4500 | 3.3 | 1080 | 19.3 |
2658 | 900 | 26.0 | 4500 | 3.3 | 1125 | 19.3 |
2659 | 900 | 26.0 | 4500 | 3.3 | 1170 | 19.3 |
2660 | 900 | 26.0 | 4500 | 3.3 | 1215 | 19.3 |
2661 | 900 | 26.0 | 4500 | 3.3 | 1260 | 19.3 |
2662 | 900 | 26.0 | 4500 | 3.3 | 1305 | 19.3 |
2663 | 900 | 26.0 | 4500 | 3.3 | 1350 | 19.3 |
2664 | 900 | 26.0 | 4500 | 3.3 | 1395 | 19.3 |
2665 | 900 | 26.0 | 4500 | 3.3 | 1440 | 19.3 |
2666 | 900 | 26.0 | 4500 | 3.3 | 1485 | 19.3 |
2667 | 900 | 26.0 | 4500 | 3.3 | 1530 | 19.3 |
2668 | 900 | 26.0 | 4500 | 3.3 | 1575 | 19.3 |
2863 | 800 | 23.0 | 4000 | 2.0 | 2920 | 19.0 |
2575 | 950 | 27.9 | 4750 | 4.8 | 611 | 18.3 |
2831 | 800 | 25.2 | 4000 | 3.8 | 1640 | 17.7 |
2729 | 850 | 24.6 | 4250 | 3.5 | 882 | 17.5 |
2730 | 850 | 24.6 | 4250 | 3.5 | 924 | 17.5 |
2731 | 850 | 24.6 | 4250 | 3.5 | 966 | 17.5 |
2732 | 850 | 24.6 | 4250 | 3.5 | 1008 | 17.5 |
2733 | 850 | 24.6 | 4250 | 3.5 | 1050 | 17.5 |
2734 | 850 | 24.6 | 4250 | 3.5 | 1092 | 17.5 |
2735 | 850 | 24.6 | 4250 | 3.5 | 1134 | 17.5 |
2736 | 850 | 24.6 | 4250 | 3.5 | 1176 | 17.5 |
2737 | 850 | 24.6 | 4250 | 3.5 | 1218 | 17.5 |
2738 | 850 | 24.6 | 4250 | 3.5 | 1260 | 17.5 |
2739 | 850 | 24.6 | 4250 | 3.5 | 1302 | 17.5 |
2740 | 850 | 24.6 | 4250 | 3.5 | 1344 | 17.5 |
2741 | 850 | 24.6 | 4250 | 3.5 | 1386 | 17.5 |
2742 | 850 | 24.6 | 4250 | 3.5 | 1428 | 17.5 |
2743 | 850 | 24.6 | 4250 | 3.5 | 1470 | 17.5 |
2744 | 850 | 24.6 | 4250 | 3.5 | 1512 | 17.5 |
2745 | 850 | 24.6 | 4250 | 3.5 | 1554 | 17.5 |
2746 | 850 | 24.6 | 4250 | 3.5 | 1596 | 17.5 |
2922 | 750 | 24.7 | 3750 | 4.0 | 1665 | 16.7 |
2813 | 800 | 23.1 | 4000 | 3.8 | 920 | 15.6 |
2814 | 800 | 23.1 | 4000 | 3.8 | 960 | 15.6 |
2815 | 800 | 23.1 | 4000 | 3.8 | 1000 | 15.6 |
2816 | 800 | 23.1 | 4000 | 3.8 | 1040 | 15.6 |
2817 | 800 | 23.1 | 4000 | 3.8 | 1080 | 15.6 |
2818 | 800 | 23.1 | 4000 | 3.8 | 1120 | 15.6 |
2819 | 800 | 23.1 | 4000 | 3.8 | 1160 | 15.6 |
2820 | 800 | 23.1 | 4000 | 3.8 | 1200 | 15.6 |
2821 | 800 | 23.1 | 4000 | 3.8 | 1240 | 15.6 |
2822 | 800 | 23.1 | 4000 | 3.8 | 1280 | 15.6 |
2823 | 800 | 23.1 | 4000 | 3.8 | 1320 | 15.6 |
2824 | 800 | 23.1 | 4000 | 3.8 | 1360 | 15.6 |
2825 | 800 | 23.1 | 4000 | 3.8 | 1400 | 15.6 |
2826 | 800 | 23.1 | 4000 | 3.8 | 1440 | 15.6 |
2827 | 800 | 23.1 | 4000 | 3.8 | 1480 | 15.6 |
2828 | 800 | 23.1 | 4000 | 3.8 | 1520 | 15.6 |
2829 | 800 | 23.1 | 4000 | 3.8 | 1560 | 15.6 |
2830 | 800 | 23.1 | 4000 | 3.8 | 1600 | 15.6 |
2921 | 750 | 23.6 | 3750 | 4.0 | 1628 | 15.6 |
2752 | 850 | 25.1 | 4250 | 4.9 | 1848 | 15.3 |
2903 | 750 | 22.1 | 3750 | 3.6 | 962 | 14.9 |
2904 | 750 | 21.7 | 3750 | 4.0 | 999 | 13.7 |
2905 | 750 | 21.7 | 3750 | 4.0 | 1036 | 13.7 |
2906 | 750 | 21.7 | 3750 | 4.0 | 1073 | 13.7 |
2907 | 750 | 21.7 | 3750 | 4.0 | 1110 | 13.7 |
2908 | 750 | 21.7 | 3750 | 4.0 | 1147 | 13.7 |
2909 | 750 | 21.7 | 3750 | 4.0 | 1184 | 13.7 |
2910 | 750 | 21.7 | 3750 | 4.0 | 1221 | 13.7 |
2911 | 750 | 21.7 | 3750 | 4.0 | 1258 | 13.7 |
2912 | 750 | 21.7 | 3750 | 4.0 | 1295 | 13.7 |
2913 | 750 | 21.7 | 3750 | 4.0 | 1332 | 13.7 |
2914 | 750 | 21.7 | 3750 | 4.0 | 1369 | 13.7 |
2915 | 750 | 21.7 | 3750 | 4.0 | 1406 | 13.7 |
2916 | 750 | 21.7 | 3750 | 4.0 | 1443 | 13.7 |
2917 | 750 | 21.7 | 3750 | 4.0 | 1480 | 13.7 |
2918 | 750 | 21.7 | 3750 | 4.0 | 1517 | 13.7 |
2919 | 750 | 21.7 | 3750 | 4.0 | 1554 | 13.7 |
2920 | 750 | 21.7 | 3750 | 4.0 | 1591 | 13.7 |
3019 | 700 | 22.0 | 3500 | 4.3 | 1645 | 13.4 |
3018 | 700 | 21.7 | 3500 | 4.3 | 1610 | 13.2 |
3107 | 650 | 19.1 | 3250 | 3.2 | 1056 | 12.7 |
3126 | 650 | 21.4 | 3250 | 4.6 | 1664 | 12.2 |
3001 | 700 | 20.2 | 3500 | 4.3 | 1015 | 11.7 |
3002 | 700 | 20.2 | 3500 | 4.3 | 1050 | 11.7 |
3003 | 700 | 20.2 | 3500 | 4.3 | 1085 | 11.7 |
3004 | 700 | 20.2 | 3500 | 4.3 | 1120 | 11.7 |
3005 | 700 | 20.2 | 3500 | 4.3 | 1155 | 11.7 |
3006 | 700 | 20.2 | 3500 | 4.3 | 1190 | 11.7 |
3007 | 700 | 20.2 | 3500 | 4.3 | 1225 | 11.7 |
3008 | 700 | 20.2 | 3500 | 4.3 | 1260 | 11.7 |
3009 | 700 | 20.2 | 3500 | 4.3 | 1295 | 11.7 |
3010 | 700 | 20.2 | 3500 | 4.3 | 1330 | 11.7 |
3011 | 700 | 20.2 | 3500 | 4.3 | 1365 | 11.7 |
3012 | 700 | 20.2 | 3500 | 4.3 | 1400 | 11.7 |
3013 | 700 | 20.2 | 3500 | 4.3 | 1435 | 11.7 |
3014 | 700 | 20.2 | 3500 | 4.3 | 1470 | 11.7 |
3015 | 700 | 20.2 | 3500 | 4.3 | 1505 | 11.7 |
3016 | 700 | 20.2 | 3500 | 4.3 | 1540 | 11.7 |
3017 | 700 | 20.2 | 3500 | 4.3 | 1575 | 11.7 |
3125 | 650 | 20.4 | 3250 | 4.6 | 1632 | 11.2 |
3564 | 500 | 14.4 | 2500 | 2.2 | 2925 | 10.0 |
3242 | 600 | 19.7 | 3000 | 5.0 | 1650 | 9.7 |
3108 | 650 | 18.8 | 3250 | 4.6 | 1088 | 9.6 |
3109 | 650 | 18.8 | 3250 | 4.6 | 1120 | 9.6 |
3110 | 650 | 18.8 | 3250 | 4.6 | 1152 | 9.6 |
3111 | 650 | 18.8 | 3250 | 4.6 | 1184 | 9.6 |
3112 | 650 | 18.8 | 3250 | 4.6 | 1216 | 9.6 |
3113 | 650 | 18.8 | 3250 | 4.6 | 1248 | 9.6 |
3114 | 650 | 18.8 | 3250 | 4.6 | 1280 | 9.6 |
3115 | 650 | 18.8 | 3250 | 4.6 | 1312 | 9.6 |
3116 | 650 | 18.8 | 3250 | 4.6 | 1344 | 9.6 |
3117 | 650 | 18.8 | 3250 | 4.6 | 1376 | 9.6 |
3118 | 650 | 18.8 | 3250 | 4.6 | 1408 | 9.6 |
3119 | 650 | 18.8 | 3250 | 4.6 | 1440 | 9.6 |
3120 | 650 | 18.8 | 3250 | 4.6 | 1472 | 9.6 |
3121 | 650 | 18.8 | 3250 | 4.6 | 1504 | 9.6 |
3122 | 650 | 18.8 | 3250 | 4.6 | 1536 | 9.6 |
3123 | 650 | 18.8 | 3250 | 4.6 | 1568 | 9.6 |
3124 | 650 | 18.8 | 3250 | 4.6 | 1600 | 9.6 |
3224 | 600 | 17.6 | 3000 | 4.2 | 1110 | 9.3 |
3495 | 500 | 15.1 | 2500 | 3.0 | 1200 | 9.1 |
3241 | 600 | 18.8 | 3000 | 5.0 | 1620 | 8.8 |
3417 | 550 | 15.5 | 2750 | 3.6 | 2916 | 8.3 |
3225 | 600 | 17.3 | 3000 | 5.0 | 1140 | 7.3 |
3226 | 600 | 17.3 | 3000 | 5.0 | 1170 | 7.3 |
3227 | 600 | 17.3 | 3000 | 5.0 | 1200 | 7.3 |
3228 | 600 | 17.3 | 3000 | 5.0 | 1230 | 7.3 |
3229 | 600 | 17.3 | 3000 | 5.0 | 1260 | 7.3 |
3230 | 600 | 17.3 | 3000 | 5.0 | 1290 | 7.3 |
3231 | 600 | 17.3 | 3000 | 5.0 | 1320 | 7.3 |
3232 | 600 | 17.3 | 3000 | 5.0 | 1350 | 7.3 |
3233 | 600 | 17.3 | 3000 | 5.0 | 1380 | 7.3 |
3234 | 600 | 17.3 | 3000 | 5.0 | 1410 | 7.3 |
3235 | 600 | 17.3 | 3000 | 5.0 | 1440 | 7.3 |
3236 | 600 | 17.3 | 3000 | 5.0 | 1470 | 7.3 |
3237 | 600 | 17.3 | 3000 | 5.0 | 1500 | 7.3 |
3238 | 600 | 17.3 | 3000 | 5.0 | 1530 | 7.3 |
3239 | 600 | 17.3 | 3000 | 5.0 | 1560 | 7.3 |
3240 | 600 | 17.3 | 3000 | 5.0 | 1590 | 7.3 |
3352 | 550 | 16.4 | 2750 | 4.7 | 1161 | 6.9 |
3388 | 550 | 16.3 | 2750 | 4.9 | 2133 | 6.5 |
Overall score = score_ratio - 2 * repetitive DNA content